filter.lib.precursors2: Filters slot PrecursorData$Consensus, and returns the...
In MarcIsak/MSLibrarian: What the Package Does (One Line, Title Case)
View source: R/FilterLibPrecursors2.R
filter.lib.precursors2 R Documentation
Filters slot PrecursorData$Consensus, and returns the filtered Precursor information in PrecursorData$ConsensusFilter
Description
Filters slot PrecursorData$Consensus, and returns the filtered Precursor information in PrecursorData$ConsensusFilter
Usage
## S3 method for class 'lib.precursors2'
filter(calibrationLib, exUniMod, precAARange, chargeRange, exAAs)
Arguments
calibrationLib
input SpectrastLibrary object
exUniMod
numeric vector with UniMod accession numbers. A Precursor having any of these modification will be excluded.
precAARange
numeric vector specifying the allowed length range in AA, that a Precursor is allowed to have.
chargeRange
allowed charge range for precursors.
exAAs
character vector describing AAs that a Precursor cannot have in its sequence.
MarcIsak/MSLibrarian documentation built on Aug. 27, 2022, 4:55 a.m.
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View source: R/FilterLibPrecursors2.R
| filter.lib.precursors2 | R Documentation |
Filters slot PrecursorData$Consensus, and returns the filtered Precursor information in PrecursorData$ConsensusFilter
Description
Filters slot PrecursorData$Consensus, and returns the filtered Precursor information in PrecursorData$ConsensusFilter
Usage
## S3 method for class 'lib.precursors2' filter(calibrationLib, exUniMod, precAARange, chargeRange, exAAs)
Arguments
calibrationLib |
input SpectrastLibrary object |
exUniMod |
numeric vector with UniMod accession numbers. A Precursor having any of these modification will be excluded. |
precAARange |
numeric vector specifying the allowed length range in AA, that a Precursor is allowed to have. |
chargeRange |
allowed charge range for precursors. |
exAAs |
character vector describing AAs that a Precursor cannot have in its sequence. |
R Package Documentation
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