make.deeplc.inputs: Creates input csv files for retention time predictions in...

View source: R/MakeDeepLcInputs.R

make.deeplc.inputsR Documentation

Creates input csv files for retention time predictions in DeepLC

Description

Creates input csv files for retention time predictions in DeepLC

Usage

make.deeplc.inputs(inputLib, calibLib, outputFolder, nCal)

Arguments

inputLib

path to input spectral library in CSV-format (Spectronaut) which should have its retention time changed.

calibLib

path to calibration library as created by the MSLibrarian package (.RData)

outputFolder

path to output folder where DeepLC input files will be added.

nCal

numeric value (nCal > 0 & nCal <= 1), giving the proportion of peptides with known retention times to use for calibration.


MarcIsak/MSLibrarian documentation built on Aug. 27, 2022, 4:55 a.m.