BridgeRPvalueEvaluation: Calculate RNA half-life from BRIC-seq data
In Naoto-Imamachi/BridgeR: Comprehensive BRIC-seq data analysis tool

Description Usage Arguments Details Value Note Author(s) References Examples

Calculate RNA half-life from BRIC-seq data

BridgeRPvalueEvaluation(InputFile="BridgeR_5C_HalfLife_calculation_R2_selection.txt",
                                    group,
                                    hour,
                                    ComparisonFile,
                                    InforColumn=4,
                                    CutoffDataPointNumber = 4,
                                    OutputFile="BridgeR_6_HalfLife_Pvalue_estimation.txt",
                                    Calibration=F)

`InputFile`	File path/name
`group`	Vector(string)
`hour`	Vector(number)
`ComparisonFile`	Vector(string)
`InforColumn`	Integer
`CutoffDataPointNumber`	Integer
`OutputFile`	File path/name
`Calibration`	Bool (True or False)

Calculate RNA half-life from BRIC-seq data

text file

2015-11-20

Naoto Imamachi

https://github.com/Naoto-Imamachi/BRIC-seq_data_analysis/tree/master/BridgeR

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (InputFile="BridgeR_5C_HalfLife_calculation_R2_selection.txt",
                                    group,
                                    hour,
                                    ComparisonFile,
                                    InforColumn=4,
                                    CutoffDataPointNumber = 4,
                                    OutputFile="BridgeR_6_HalfLife_Pvalue_estimation.txt",
                                    Calibration=F)
{
}