bt.bedpetobam: Converts feature records to BAM format.

View source: R/bt.bedpetobam.R

bt.bedpetobamR Documentation

Converts feature records to BAM format.

Description

Converts feature records to BAM format.

Usage

bt.bedpetobam(i, g, mapq = NULL, ubam = NULL, output = NULL)

Arguments

i

<bed/gff/vcf>

g

<genome>

mapq

Set the mappinq quality for the BAM records. (INT) Default: 255

ubam

Write uncompressed BAM output. Default writes compressed BAM.

output

Output filepath instead of returning output in R.


PhanstielLab/bedtoolsr documentation built on Aug. 29, 2024, 5:37 p.m.