establishPaths: Determines if arguments are paths or R objects. Makes temp...

In PhanstielLab/bedtoolsr: Bedtools Wrapper

Determines if arguments are paths or R objects. Makes temp files when neccesary. Makes a list of files to use in bedtools call. Makes a list of temp files to delete at end of function.

Description

Determines if arguments are paths or R objects. Makes temp files when neccesary. Makes a list of files to use in bedtools call. Makes a list of temp files to delete at end of function.

Usage

establishPaths(input, name = "", allowRobjects = TRUE)

Arguments

input	the input for an argument. Could be a path to a file, an R object (data frame), or a list of any combination thereof
name	the name of the argument
allowRobjects	boolean whether or not to allow R objects as inputs ### Define a function that determines establishes files and paths for bedtools functions

PhanstielLab/bedtoolsr documentation built on Nov. 13, 2022, 10:38 p.m.