bt.cluster: Clusters overlapping/nearby BED/GFF/VCF intervals.

View source: R/bt.cluster.R

bt.clusterR Documentation

Clusters overlapping/nearby BED/GFF/VCF intervals.

Description

Clusters overlapping/nearby BED/GFF/VCF intervals.

Usage

bt.cluster(i, s = NULL, d = NULL, output = NULL)

Arguments

i

<bed/gff/vcf>

s

Force strandedness. That is, only merge features that are the same strand. - By default, merging is done without respect to strand.

d

Maximum distance between features allowed for features to be merged. - Def. 0. That is, overlapping & book-ended features are merged. - (INTEGER)

output

Output filepath instead of returning output in R.


PhanstielLab/bedtoolsr documentation built on Aug. 29, 2024, 5:37 p.m.