applyQDNAFilter: Apply QDNAseq filter
In PietaSchofield/plibb: Pieta Schofield's repository of former useful R functions
View source: R/applyQDNAFilter.R
Description
function to apply a filter to a HMMcopy RangedData object and return a filtered RangedData object
Usage
1
applyQDNAFilter(rd, filterGR = filter150kb, outfile = NULL)
Arguments
rd
rangeddata input object
outfile
a file to write the output to a bigwig file for viewing in IGV
filter
a filter in the form of a granges object
PietaSchofield/plibb documentation built on May 6, 2019, 6:45 p.m.
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View source: R/applyQDNAFilter.R
Description
function to apply a filter to a HMMcopy RangedData object and return a filtered RangedData object
Usage
1 | applyQDNAFilter(rd, filterGR = filter150kb, outfile = NULL)
|
Arguments
rd |
rangeddata input object |
outfile |
a file to write the output to a bigwig file for viewing in IGV |
filter |
a filter in the form of a granges object |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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