API for PietaSchofield/plibb
Pieta Schofield's repository of former useful R functions

Global functions
CitePres Man page Source code
DSFromFC Man page Source code
addCite Man page Source code
addcitekey Source code
alignBWA Man page Source code
alignStar Man page Source code
alignSubjunc Man page Source code
alignSubread Man page Source code
anscore Man page Source code
applyQDNAFilter Man page Source code
autoCommit Man page Source code
bamToBed Man page Source code
base2dec Man page Source code
bigcor Man page Source code
buildAll Man page Source code
cnvAnnoGenes Man page Source code
cnvAnnoSegs Man page Source code
cnvCopyNumber Man page Source code
cnvGIindex Man page Source code
cnvLogRatio Man page Source code
cnvSegment Man page Source code
codeHook Man page Source code
collateRPG Man page Source code
custHMMsegment Man page Source code
dedupCNV Man page Source code
delWeek Man page Source code
edt Man page Source code
evalCluster2 Man page Source code
evalSigSurv Man page Source code
factorise Man page Source code
filter150kb Man page
genBibtex Man page Source code
genCNValignmentStats Man page Source code
genCNVmapGC Man page Source code
genCNVwigs Man page Source code
genCovTracks Man page Source code
genPBSHead Man page Source code
genSGEHead Man page Source code
genSRstats Man page Source code
genSlurmHead Man page Source code
getFeatures Source code
getFiles Man page Source code
getProject Man page Source code
getQC Man page Source code
getSpikeInNorm Man page Source code
getWeek Man page Source code
getauthor Source code
getcitkey Source code
getfield Source code
go Man page Source code
hmAnalysis Man page Source code
knithook_plot Man page Source code
lck Man page Source code Source code
loadSubreadOutput Man page Source code
logRun Man page Source code
logTime Man page Source code
macOpen Man page Source code
mergeBAMS Man page Source code
multiplot Man page Source code
newFile Man page Source code
newNote Man page Source code
newProject Man page Source code
plib Man page
plib-package Man page
plotCNV Man page Source code
plotKM Man page Source code
plotSubTree Man page Source code
pname Source code
pubGoD Man page Source code
publish Man page Source code
qstat Man page Source code
rb Man page Source code
rc Man page Source code
rcmd Man page Source code
readDREME Man page Source code
readENCODE Man page Source code
readFC Man page Source code
readGMT Man page Source code
readMEME Man page Source code
readPrism Man page Source code
readTRANSFACT Man page Source code
retGenBank Man page Source code
rlsFiles Man page Source code
rsh Man page Source code
runCPH Man page Source code
runFC Man page Source code
runFastQC Man page Source code
runHMMcopy Man page Source code
runJAFFA Man page Source code
runMACS2 Man page Source code
runQSTrim Man page Source code
runQualimap Man page Source code
runRScript Man page Source code
runSICER Man page Source code
runScript Man page Source code
runStarAlign Man page Source code
sortBAM Man page Source code
splitBAMS Man page Source code
splitStrandedBAM Man page Source code
ssBAMtoBWs Man page Source code
sswigToBigWig Man page Source code
strandedBamImport Man page Source code
stripPlurals Man page Source code
subFastQC Man page Source code
subJob Man page Source code
sumCNValignStats Man page Source code
sumForPlot Man page Source code
summariseQualimap Man page Source code
summariseSTAR Man page Source code
summariseSubread Man page Source code
survAnal Man page Source code
survAnal2 Man page Source code
survClust Man page Source code
survClustAnal Man page Source code
survFit Man page Source code
survFit2 Man page Source code
survFit3 Man page Source code
tabixFile Man page Source code
testSurvAnal Source code Source code
PietaSchofield/plibb documentation built on Nov. 11, 2018, 5:15 a.m.