binarize_exp: Binarize gene expression
In SGDDNB/GeneSwitches: Discover the order of gene regulatory events during cell state transitions
Description
This function generates on/off binarized data for gene expression
Usage
1
2
binarize_exp(sce, fix_cutoff = FALSE, binarize_cutoff = 0.2,
ncores = 3)
Arguments
sce
SingleCellExperiment
fix_cutoff
Logical. if use fixed global cutoff for binarization, default FALSE
binarize_cutoff
fixed global cutoff for binarization, default 0.2
ncores
number of cores
SGDDNB/GeneSwitches documentation built on Dec. 16, 2020, 9:32 a.m.
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Description
This function generates on/off binarized data for gene expression
Usage
1 2 | binarize_exp(sce, fix_cutoff = FALSE, binarize_cutoff = 0.2,
ncores = 3)
|
Arguments
sce |
SingleCellExperiment |
fix_cutoff |
Logical. if use fixed global cutoff for binarization, default FALSE |
binarize_cutoff |
fixed global cutoff for binarization, default 0.2 |
ncores |
number of cores |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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