common_genes: Identify common switching genes between paths
In SGDDNB/GeneSwitches: Discover the order of gene regulatory events during cell state transitions
View source: R/compare_trajectories.R
Description
This function identifies common switching genes between two paths
Usage
1
2
common_genes(toplotgl_Rsub1, toplotgl_Rsub2, path1name = "Path1Genes",
path2name = "Path2Genes", r2cutoff = 0.05)
Arguments
toplotgl_Rsub1
switching genes of path1
toplotgl_Rsub2
switching genes of path2
path1name
name of path1 given by user
path2name
name of path2 given by user
r2cutoff
pseudo R^2 cutoff
SGDDNB/GeneSwitches documentation built on Dec. 16, 2020, 9:32 a.m.
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View source: R/compare_trajectories.R
Description
This function identifies common switching genes between two paths
Usage
1 2 | common_genes(toplotgl_Rsub1, toplotgl_Rsub2, path1name = "Path1Genes",
path2name = "Path2Genes", r2cutoff = 0.05)
|
Arguments
toplotgl_Rsub1 |
switching genes of path1 |
toplotgl_Rsub2 |
switching genes of path2 |
path1name |
name of path1 given by user |
path2name |
name of path2 given by user |
r2cutoff |
pseudo R^2 cutoff |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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