plot_timeline_ggplot: Plot switching genes
In SGDDNB/GeneSwitches: Discover the order of gene regulatory events during cell state transitions
Description
This function plots switching genes on the pseudo-timeline
Usage
1
2
plot_timeline_ggplot(tml, timedata, iffulltml = TRUE, txtsize = 3.5,
color_by = "feature_type")
Arguments
tml
switching genes
timedata
pseudotime for cells
iffulltml
if plot the full timeline
txtsize
text size for gene names
color_by
the cell attribute (e.g. the column of tml) to map to each cell's color
SGDDNB/GeneSwitches documentation built on Dec. 16, 2020, 9:32 a.m.
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Description
This function plots switching genes on the pseudo-timeline
Usage
1 2 | plot_timeline_ggplot(tml, timedata, iffulltml = TRUE, txtsize = 3.5,
color_by = "feature_type")
|
Arguments
tml |
switching genes |
timedata |
pseudotime for cells |
iffulltml |
if plot the full timeline |
txtsize |
text size for gene names |
color_by |
the cell attribute (e.g. the column of tml) to map to each cell's color |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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