distinct_genes: Identify distinct switching genes for each path
In SGDDNB/GeneSwitches: Discover the order of gene regulatory events during cell state transitions
View source: R/compare_trajectories.R
Description
This function identifies distinct switching genes for each path
Usage
1
2
3
distinct_genes(toplotgl_Rsub1, toplotgl_Rsub2, path1name = "Path1Genes",
path2name = "Path2Genes", r2cutoff = 0.05, scale_timeline = FALSE,
path1time = NULL, path2time = NULL, bin = 100)
Arguments
toplotgl_Rsub1
switching genes of path1
toplotgl_Rsub2
switching genes of path2
path1name
name of path1 given by user
path2name
name of path2 given by user
r2cutoff
pseudo R^2 cutoff
SGDDNB/GeneSwitches documentation built on Dec. 16, 2020, 9:32 a.m.
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View source: R/compare_trajectories.R
Description
This function identifies distinct switching genes for each path
Usage
1 2 3 | distinct_genes(toplotgl_Rsub1, toplotgl_Rsub2, path1name = "Path1Genes",
path2name = "Path2Genes", r2cutoff = 0.05, scale_timeline = FALSE,
path1time = NULL, path2time = NULL, bin = 100)
|
Arguments
toplotgl_Rsub1 |
switching genes of path1 |
toplotgl_Rsub2 |
switching genes of path2 |
path1name |
name of path1 given by user |
path2name |
name of path2 given by user |
r2cutoff |
pseudo R^2 cutoff |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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