compute.Modularity: Find Global Modularity (Q)
In Sage-Bionetworks/metanetwork: Network meta analysis
View source: R/compute.Modularity.R
compute.Modularity R Documentation
Find Global Modularity (Q)
Description
This function finds Function to find global modularity (Q) of a upper triangular adjacency matrix.
Usage
compute.Modularity(adj, mod, method = "Newman1")
Arguments
adj
Required. An n x n upper triangular adjacency in the matrix class
format.
mod
Required. An n x 3 dimensional data frame with column names as
Gene.ID, moduleNumber, and moduleLabel.
method
Optional. If 'Newman1' is specified modularity is instituded in
as-per the Clauset, Newman model in the function igraph::graph.modularity()
(Default = 'Newman1')
Value
Q = modularity index.
Sage-Bionetworks/metanetwork documentation built on April 27, 2022, 7:42 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/compute.Modularity.R
| compute.Modularity | R Documentation |
Find Global Modularity (Q)
Description
This function finds Function to find global modularity (Q) of a upper triangular adjacency matrix.
Usage
compute.Modularity(adj, mod, method = "Newman1")
Arguments
adj |
Required. An n x n upper triangular adjacency in the matrix class format. |
mod |
Required. An n x 3 dimensional data frame with column names as Gene.ID, moduleNumber, and moduleLabel. |
method |
Optional. If 'Newman1' is specified modularity is instituded in as-per the Clauset, Newman model in the function igraph::graph.modularity() (Default = 'Newman1') |
Value
Q = modularity index.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.