Files in Sage-Bionetworks/metanetwork
Network meta analysis

.Rbuildignore

.github/.gitignore

.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md

.github/workflows/R-CMD-check.yaml

.github/workflows/pkgdown.yaml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

R/FindModules.leading_eigen.once.R R/applySparrowBonferroni.R R/applySparrowFDR.R R/aracne.R R/arbitrarySparsity.R R/buildConsensus.R R/c3netWrapper.R R/calcHyperPval.R R/compute.LocalModularity.R R/compute.Modularity.R R/compute.ModularityDensity.R R/compute.ModuleQualityMetric.R R/computeBICcurve.R R/computeDriverDistance.R R/computeDriverDistancePvalue.R R/correlation.R R/covarianceSelection.R R/covarianceSelectionBisection.R R/covarianceSelectionMBPath.R R/covarianceSelectionPath.R R/deployNetworkSparsity.R R/fastlm.R R/fastlmbic.R R/fdrThres.R R/findModules.CFinder.R R/findModules.CFinder.once.R R/findModules.GANXiS.R R/findModules.GANXiS.once.R

R/findModules.Speakeasy

R/findModules.consensusCluster.R R/findModules.consensusKmeans.R R/findModules.edge_betweenness.R R/findModules.edge_betweenness.once.R R/findModules.fast_greedy.R R/findModules.fast_greedy.once.R R/findModules.hclust.R R/findModules.infomap.R R/findModules.infomap.once.R R/findModules.label_prop.R R/findModules.label_prop.once.R R/findModules.leading_eigen.R R/findModules.linkcommunities.R R/findModules.linkcommunities.once.R R/findModules.louvain.R R/findModules.louvain.once.R R/findModules.megena.R R/findModules.spinglass.R R/findModules.spinglass.once.R R/findModules.walktrap.R R/findModules.walktrap.once.R R/fisherEnrichment.R R/genie3.R R/globals.R R/installAracne.R R/lassoAIC.R R/lassoBIC.R R/lassoCV1se.R R/lassoCVmin.R

R/layer_Speakeasy.R

R/mpiWrapper.R R/mrnetWrapper.R R/multiplot.R R/rankConsensus.R R/rankConsensus2.R R/rankedEdgeList.R R/regulatorAnalysis.directed.R R/regulatorAnalysis.directed_weighted.R R/regulatorAnalysis.undirected.R R/regulatorAnalysis.undirected_weighted.R R/ridgeAIC.R R/ridgeBIC.R R/ridgeCV1se.R R/ridgeCVmin.R R/run.consensus.clustering.R R/score.nodes.R R/simulateNetworkData.R R/sparrow2Z.R R/sparrowNetwork.R R/sparrowZ.R R/synGetFiles.R R/tigress.R R/wgcnaSoftThreshold.R R/wgcnaTOM.R R/winsorizeData.R README.md

Read-and-delete-me

_pkgdown.yml

inst/Docker/Dockerfile

inst/aracne/ARACNE.src.tar.gz

inst/config/network-consensus/CBE_consensus.yml

inst/config/network-consensus/microglial_consensus.yml

inst/config/network-construction/c3net.yml

inst/config/network-construction/lassoBIC.yml

inst/config/network-construction/lassoCV1se.yml

inst/config/network-construction/lassoCVmin.yml

inst/config/network-construction/mrnet.yml

inst/config/network-construction/ridgeAIC.yml

inst/config/network-construction/ridgeCV1se.yml

inst/config/network-construction/ridgeCVmin.yml

inst/config/network-construction/sparrowZ.yml

inst/config/network-construction/test_sparrowZ.yml

inst/config/network-construction/wgcna.yml

inst/config/network-module/module.yml

metanetwork.Rproj

vignettes/Consensus_Wrapper_Config_Documentation.Rmd vignettes/Module_Detection_Config_Documentation.Rmd vignettes/Network_Wrapper_Config_Documentation.Rmd

Sage-Bionetworks/metanetwork documentation built on April 27, 2022, 7:42 a.m.

rdrr.io home R language documentation Run R code online

CRAN packages Bioconductor packages R-Forge packages GitHub packages

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Sage-Bionetworks/metanetwork
Network meta analysis

Files in Sage-Bionetworks/metanetwork
Network meta analysis

R Package Documentation

Browse R Packages

We want your feedback!

Sage-Bionetworks/metanetwork Network meta analysis

Files in Sage-Bionetworks/metanetwork Network meta analysis

R Package Documentation

Browse R Packages

We want your feedback!

Sage-Bionetworks/metanetwork
Network meta analysis

Files in Sage-Bionetworks/metanetwork
Network meta analysis