findModules.GANXiS.once: Find Modules using GANXIS

View source: R/findModules.GANXiS.once.R

findModules.GANXiS.onceR Documentation

Find Modules using GANXIS

Description

This function finds modules with GANXIS

Usage

findModules.GANXiS.once(adj, path, min.module.size)

Arguments

adj

A n x n upper triangular adjacency in the matrix class format.

path

Required. File path location of GANXiS

min.module.size

Optional. Integer between 1 and n genes. (Default = 30)

Value

GeneModules = n x 3 dimensional data frame with column names as Gene.ID, moduleNumber, and moduleLabel.


Sage-Bionetworks/metanetwork documentation built on April 27, 2022, 7:42 a.m.