findModules.louvain.once: Find Modules with Network Adjacency Matrix Using Louvain...
In Sage-Bionetworks/metanetwork: Network meta analysis
View source: R/findModules.louvain.once.R
findModules.louvain.once R Documentation
Find Modules with Network Adjacency Matrix Using Louvain Clustering
Description
This function tries to get modules from network adjacency matrix using igraph's
louvain clusting function.
Usage
findModules.louvain.once(adj, min.module.size)
Arguments
adj
A n x n upper triangular adjacency in the matrix class format.
min.module.size
Optional. Integer between 1 and n genes. (Default = 30)
Value
GeneModules = n x 3 dimensional data frame with column names as Gene.ID,
moduleNumber, and moduleLabel.
Sage-Bionetworks/metanetwork documentation built on April 27, 2022, 7:42 a.m.
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View source: R/findModules.louvain.once.R
| findModules.louvain.once | R Documentation |
Find Modules with Network Adjacency Matrix Using Louvain Clustering
Description
This function tries to get modules from network adjacency matrix using igraph's louvain clusting function.
Usage
findModules.louvain.once(adj, min.module.size)
Arguments
adj |
A n x n upper triangular adjacency in the matrix class format. |
min.module.size |
Optional. Integer between 1 and n genes. (Default = 30) |
Value
GeneModules = n x 3 dimensional data frame with column names as Gene.ID, moduleNumber, and moduleLabel.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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