View source: R/findModules.fast_greedy.R
findModules.fast_greedy | R Documentation |
This function wraps permutations of finding modules with igraph::cluster_fast_greedy().
findModules.fast_greedy(adj, nperm = 10, min.module.size = 30)
adj |
A n x n upper triangular adjacency in the matrix class format. |
nperm |
Optional. Number of permutation on the gene ordering. (Default = 10) |
min.module.size |
Optional. Integer between 1 and n genes. (Default = 30) |
GeneModules = n x 3 dimensional data frame with column names as Gene.ID, moduleNumber, and moduleLabel.
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