mpiWrapper | R Documentation |
This function Sparrow Regression wrapped with the Rmpi::mpi parralel implementation. User specifies between sparrowZ, sparrow2Z, or sparrow2ZFDR implementation.
mpiWrapper( data, nodes, pathv, regressionFunction, outputpath, eigen = NULL, regulatorIndex = NULL, hosts = NULL )
data |
Required. Expression matrix to be used for network construction. |
nodes |
Required. The number of nodes to run the process over. |
pathv |
Required. |
regressionFunction |
Required. Character vector specifying the specific sparrow regression function to deploy. Options are one of c("sparrowZ", "sparrow2Z", "sparrow2ZFDR") |
outputpath |
Required. The output path to save the resulting coexpression network |
eigen |
Optional. (Default = NULL) |
regulatorIndex |
Optional. (Default = NULL) |
hosts |
Optional. (Default = NULL) |
NULL. Saves a sparrow network object to paste0('outputpath', ‘regressionFunction',’Network.csv')
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