avg_num_alleles_per_locus: Estimate the estimated number of alleles (copies) per locus

In SingerLab/gac: Genetic Analysis of Cells

Estimate the estimated number of alleles (copies) per locus

Description

Function is ‘experimental' and requires validation to asses it’s value

Usage

avg_num_alleles_per_locus(cnr, exclude.chr = NULL, chrom.col = "bin.chrom")

Arguments

cnr	a cnr bundle
exclude.chr	chromosomes to exclude, default X, Y
chrom.col	name of column containing chromosomes

Value

Estimates the number of alleles (copies per locus), across the population.

Function is ‘experimental' and requires validation to asses it’s value

Examples

data(cnr)

avg_num_alleles_per_locus(cnr)

avg_num_alleles_per_locus(cnr, exclude.chr = c("X", "Y"))

SingerLab/gac documentation built on March 23, 2024, 5:15 a.m.