export_cnr: export CNR to flat text files

In SingerLab/gac: Genetic Analysis of Cells

export CNR to flat text files

Description

export CNR to flat text files

Usage

export_cnr(cnr, outdir = ".", ...)

Arguments

cnr	a cnr
outdir	path to output directory
...	arguments passed to write.table and ape::write.tree

Value

Writes X, Y, genes, qc, gene.index, and chromInfo to 'outdir'. If 'phylo' exists, a '.newick' format tree is also exported. Furthermore, if 'DDRC' profiles are also present, files for these are also written to the specified directory.

Examples

## Not run: 
data(cnr)

export_cnr(cnr, outdir = "cnr_out/")

## End(Not run)

SingerLab/gac documentation built on March 23, 2024, 5:15 a.m.