list_gene_symbols: list out genes

In SingerLab/gac: Genetic Analysis of Cells

list out genes

Description

list out genes

Usage

list_gene_symbols(cnr, at, identifier = "hgnc.symbol")

Arguments

cnr	a cnr bundle
at	character, coordinate string e.g. "1:123456780:124567890", The at coordinates string is run through convert_coord, which removes the preceeding 'chr' and commas, and substitutes any dash '-' with ':' to fit the format used here
identifier	character, name of the gene identifier column to output, default "hgnc.symbol"

Value

A vector containing a list of genes or other gene identifier.

Examples

data(cnr)

list_gene_symbols(cnr, at = "12:58000000:59000000")

SingerLab/gac documentation built on March 23, 2024, 5:15 a.m.