calc_simu_exp: Function to calculate expected genotype data for simuation...
In Struglab/RVS: Robust Variance Score (RVS) test for association of variants from next generation sequence data with binary traits using external controls
Description
Usage
Arguments
Value
Description
Function to calculate expected genotype data for simuation data, given simulated reads, error rate and read depth.
Usage
1
calc_simu_exp(reads, error_vector, rdepth_vector)
Arguments
reads
simulated reads
error_vector
a vector for error rate for each simulated data of each person, one person by one person
rdepth_vector
a vector for read depth for each simulated data of each person, one person by one person
Value
a list includes expected genotype data (exp_geno) and population frequency (geno_freq)
Struglab/RVS documentation built on May 9, 2019, 3:11 p.m.
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Description Usage Arguments Value
Description
Function to calculate expected genotype data for simuation data, given simulated reads, error rate and read depth.
Usage
1 | calc_simu_exp(reads, error_vector, rdepth_vector)
|
Arguments
reads |
simulated reads |
error_vector |
a vector for error rate for each simulated data of each person, one person by one person |
rdepth_vector |
a vector for read depth for each simulated data of each person, one person by one person |
Value
a list includes expected genotype data (exp_geno) and population frequency (geno_freq)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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