Description Usage Arguments Value
It calls functions calc_ScoreV
,calc_ScoreV_RVS
,calc_ScoreV_likely
,test_CAST
, test_Calpha
,sample_bootstrap
1 | regScore_rare1(Y, X, njoint = 5, nperm)
|
Y |
- phenotype value, 1-cases and 0-controls |
X |
- matrix of conditional expected values/genotype calls for J variants, it has dimensions n by J, J - number of variants, n - sample size |
njoint |
number of rare variants to be grouped together |
nperm |
- number of bootstrap |
two p-values for CAST and C-alpha
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