generate_seq_1ind: Generate sequence data for one indiviudal with read depth rd...
In Struglab/RVS: Robust Variance Score (RVS) test for association of variants from next generation sequence data with binary traits using external controls
Description
Usage
Arguments
Value
Description
Generate sequence data for one indiviudal with read depth rd
it calls functions seq_call to generate sequence data with read depth = rd, each read depth has error error[i].
Usage
1
generate_seq_1ind(maf, rd, error)
Arguments
maf,
a numeric to specify the maf for one variant
rd,
a numeric, read depth of the sequence
error,
a vector with length rd, error rate for each squence call
Value
a list including read depth (rdepth), error rate (error) and a vector of length rdepth showing the sequencing data (seq)
Struglab/RVS documentation built on May 9, 2019, 3:11 p.m.
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Description Usage Arguments Value
Description
Generate sequence data for one indiviudal with read depth rd
it calls functions seq_call to generate sequence data with read depth = rd, each read depth has error error[i].
Usage
1 | generate_seq_1ind(maf, rd, error)
|
Arguments
maf, |
a numeric to specify the maf for one variant |
rd, |
a numeric, read depth of the sequence |
error, |
a vector with length rd, error rate for each squence call |
Value
a list including read depth (rdepth), error rate (error) and a vector of length rdepth showing the sequencing data (seq)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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