geno_add_2pheno: Function to add the phenotype in the 6th column of the...
In Struglab/RVS: Robust Variance Score (RVS) test for association of variants from next generation sequence data with binary traits using external controls
Description
Usage
Arguments
Value
Description
Function to add the phenotype in the 6th column of the genotype file recognizable by plink, eg, file with extension 'ped' or 'raw'.
Usage
1
geno_add_2pheno(genofile, caseIDfile)
Arguments
genofile
additive coding genotype files, it is the .raw file in plink
caseIDfile
the file including the list of case IDs
Value
a list including- geno: the genotype data with phenotype on 6th column, snps: variant information in bim format (in plink) and ncase: number of case
Struglab/RVS documentation built on May 9, 2019, 3:11 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Function to add the phenotype in the 6th column of the genotype file recognizable by plink, eg, file with extension 'ped' or 'raw'.
Usage
1 | geno_add_2pheno(genofile, caseIDfile)
|
Arguments
genofile |
additive coding genotype files, it is the .raw file in plink |
caseIDfile |
the file including the list of case IDs |
Value
a list including- geno: the genotype data with phenotype on 6th column, snps: variant information in bim format (in plink) and ncase: number of case
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.