annotate_sv_type: Get SV type from svaba generated VCF
In TearsWillFall/variantCall: An implementation of a wrapper for variant calling using MuTECT2 and Platypus GNU/Unix based systems
Description
As given by sfrenk comment on https://github.com/walaj/svaba/issues/4 annotates SV type
in svaba vcf file
Usage
1
annotate_sv_type(vcf = "", output_dir = "")
Arguments
vcf
svaba generated vcf to annotate. Get vcf
output_dir
Path to directory to output results
TearsWillFall/variantCall documentation built on Oct. 15, 2021, 8:51 p.m.
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Description
As given by sfrenk comment on https://github.com/walaj/svaba/issues/4 annotates SV type in svaba vcf file
Usage
1 | annotate_sv_type(vcf = "", output_dir = "")
|
Arguments
vcf |
svaba generated vcf to annotate. Get vcf |
output_dir |
Path to directory to output results |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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