get_sv_type: Get SV type from svaba generated VCF
In TearsWillFall/variantCall: An implementation of a wrapper for variant calling using MuTECT2 and Platypus GNU/Unix based systems
Description
As given by sfrenk comment on https://github.com/walaj/svaba/issues/4 annotates SV based on its breakpoints
Usage
1
get_sv_type(x, dat)
Arguments
x
svaba generated vcf to annotate. Get vcf
dat
Table with VCF data
TearsWillFall/variantCall documentation built on Oct. 15, 2021, 8:51 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
As given by sfrenk comment on https://github.com/walaj/svaba/issues/4 annotates SV based on its breakpoints
Usage
1 | get_sv_type(x, dat)
|
Arguments
x |
svaba generated vcf to annotate. Get vcf |
dat |
Table with VCF data |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.