plot_cn_calls: This function generates a plot of ploidy and celularity...
In TearsWillFall/variantCall: An implementation of a wrapper for variant calling using MuTECT2 and Platypus GNU/Unix based systems
Description
This function takes the path to the directory with CLONET output, as well as a tab separated file with
sample info and generates a plot of celularity and ploidy levels in the samples
Usage
1
plot_cn_calls(cn_call_data = "", sample_data = "", output_dir = "")
Arguments
cn_call_data
Path to segment data with cn calls
sample_data
Path to file with sample info
output_dir
Path to output directory.
TearsWillFall/variantCall documentation built on Oct. 15, 2021, 8:51 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
This function takes the path to the directory with CLONET output, as well as a tab separated file with sample info and generates a plot of celularity and ploidy levels in the samples
Usage
1 | plot_cn_calls(cn_call_data = "", sample_data = "", output_dir = "")
|
Arguments
cn_call_data |
Path to segment data with cn calls |
sample_data |
Path to file with sample info |
output_dir |
Path to output directory. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.