tab_indx: Index tab separated genomic regions
In TearsWillFall/variantCall: An implementation of a wrapper for variant calling using MuTECT2 and Platypus GNU/Unix based systems
Description
This function takes a .vcf.bgz tab separated genomic region file and generates an index for it
Usage
1
Arguments
bin_path
REQUIRED Path to bcftools binary. Default tools/htslib/tabix.
file
REQUIRED Path to VCF file to index.
verbose
OPTIONAL Enables progress messages. Default False.
TearsWillFall/variantCall documentation built on Oct. 15, 2021, 8:51 p.m.
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Description
This function takes a .vcf.bgz tab separated genomic region file and generates an index for it
Usage
1 |
Arguments
bin_path |
REQUIRED Path to bcftools binary. Default tools/htslib/tabix. |
file |
REQUIRED Path to VCF file to index. |
verbose |
OPTIONAL Enables progress messages. Default False. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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