plot_celullarity: This function generates a plot of ploidy and celularity...
In TearsWillFall/variantCall: An implementation of a wrapper for variant calling using MuTECT2 and Platypus GNU/Unix based systems
Description
This function takes the path to the directory with CLONET output, as well as a tab separated file with
sample info and generates a plot of celularity and ploidy levels in the samples
Usage
1
plot_celullarity(clonet_dir = "", sample_data = "", output_dir = "")
Arguments
clonet_dir
Path to clonet output directory
sample_data
Path to file with sample info
output_dir
Path to output directory.
TearsWillFall/variantCall documentation built on Oct. 15, 2021, 8:51 p.m.
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Description
This function takes the path to the directory with CLONET output, as well as a tab separated file with sample info and generates a plot of celularity and ploidy levels in the samples
Usage
1 | plot_celullarity(clonet_dir = "", sample_data = "", output_dir = "")
|
Arguments
clonet_dir |
Path to clonet output directory |
sample_data |
Path to file with sample info |
output_dir |
Path to output directory. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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