API for VilainLab/Nanotator
Next generation structural variant annotation and classification

Global functions
BNDBfrequency Man page Source code
DGVfrequency Man page Source code
Decipherfrequency Man page Source code
FamilyInfoPrep Man page Source code
OverlapRNAseq Man page Source code
OverlapRNAseq_solo Man page Source code
RNAseqcombine Man page Source code
RNAseqcombine_solo Man page Source code
SVexpression_duo_trio Man page Source code
SVexpression_solo Man page Source code
buildrunBNBedFiles Man page Source code
clinvar_gene Man page Source code
extract_clinvar_mod Man page Source code
gene_extraction Man page Source code
gene_list_generation Man page Source code
gtr_gene Man page Source code
internalFrequencyTrio_Duo Man page Source code
internalFrequency_solo Man page Source code
makeInternalBNDatabase Man page Source code
mergingSMAP_SE Man page Source code
mergingSMAP_SVMerge Man page Source code
merging_SE_SVMerge Man page Source code
nanotatoR Man page
nanotatoR_Duo_SVmerge Man page Source code
nanotatoR_SVmerge_Trio Man page Source code
nanotatoR_main_Duo_SE Man page Source code
nanotatoR_main_Solo_SE Man page Source code
nanotatoR_main_Solo_SVmerge Man page Source code
nanotatoR_main_Trio_SE Man page Source code
nonOverlapGenes Man page Source code
nonOverlapRNAseq Man page Source code
nonOverlapRNAseq_solo Man page Source code
nonOverlappingDNGenes Man page Source code
nonOverlappingUPGenes Man page Source code
omim_gene Man page Source code
overlapGenes Man page Source code
overlapnearestgeneSearch Man page Source code
overlappingGenes Man page Source code
phenoextractHPO_mod Man page Source code
readBNBedFiles Man page Source code
readSMap Man page Source code
readSMap_DLE Man page Source code
reading_GTR Man page Source code
reading_mim2gene Man page Source code
run_bionano_filter_SE_Trio Man page Source code
run_bionano_filter_SE_duo Man page Source code
run_bionano_filter_SE_solo Man page Source code
run_bionano_filter_SVMerge_Trio Man page Source code
run_bionano_filter_SVMerge_duo Man page Source code
run_bionano_filter_SVMerge_solo Man page Source code
VilainLab/Nanotator documentation built on Oct. 9, 2021, 8:59 p.m.