readSMap_DLE: Reads DLE SMAP files to extract information

In VilainLab/Nanotator: Next generation structural variant annotation and classification

Description

Reads DLE SMAP files to extract information

Usage

readSMap_DLE(smap, smapdata, input_fmt_smap = "Text")

Arguments

smap	character. Path to SMAP file.
smapdata	dataframe. variable for smap dataset.
input_fmt_smap	character. input format for smap text or dataframe.

Value

Data Frame or text file. Contains the SMAP information.

Examples

smapName="GM24385_Ason_DLE1_VAP_trio5.smap"
smap = system.file("extdata", smapName, package="nanotatoR")
readSMap_DLE(smap, input_fmt_smap = "Text")

VilainLab/Nanotator documentation built on Oct. 9, 2021, 8:59 p.m.