Files in VilainLab/Nanotator
Next generation structural variant annotation and classification

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/Bed_SV_Comp.r R/DGV_extraction.r R/DecipherExtraction.r R/Internal_frequency.r R/cohortDB_comp.r R/entrez_extract.r R/filterread.r R/mainAnnotator.r R/nanotatoR.r README.md
inst/extdata/BNSOLO2_merged.txt
inst/extdata/Bionano_config/current_ctrl_dup_hg19_anonymize.txt
inst/extdata/Bionano_config/current_ctrl_ins_del_hg19_anonymize.txt
inst/extdata/Bionano_config/current_ctrl_inv_hg19_anonymize.txt
inst/extdata/Bionano_config/current_ctrl_trans_hg19_anonymize.txt
inst/extdata/F1.1_TestSample1_solo_hg19.smap
inst/extdata/GRCh37_hg19_variants_2016-05-15.txt
inst/extdata/Homo_sapiens.Hg19.bed
inst/extdata/Homo_sapiens.Hg19_BN_bed.txt
inst/extdata/SoloFile/F1.1_TestSample1_solo_hg19.smap
inst/extdata/SoloFile/F1.2_TestSample2_solo_hg19.smap
inst/extdata/SoloFile/F1.3_TestSample3_solo_hg19.smap
inst/extdata/SoloFile/F2.2_TestSample4_solo_hg19.smap
inst/extdata/nanotatoR_merged.txt
inst/extdata/population_cnv.txt
inst/scripts/data.r man/DGV_extraction.Rd man/Decipher_extraction.Rd man/buildrunBNBedFiles.Rd man/clinvar_gene.Rd man/cohortFrequency.Rd man/compSmapbed.Rd man/gene_extraction.Rd man/gene_list_generation.Rd man/gtr_gene.Rd man/internalFrequency.Rd man/makeMergedSVData.Rd man/makeMergedSmapData.Rd man/nanotatoR.Rd man/nanotatoR_main.Rd man/nonOverlapGenes.Rd man/omim_gene.Rd man/overlapGenes.Rd man/readBNBedFiles.Rd man/readSMap.Rd man/run_bionano_filter.Rd tests/testthat.R tests/testthat/test_entrez_extract.R vignettes/nanotatoR.Rmd
VilainLab/Nanotator documentation built on May 20, 2019, 5:41 p.m.