mergingSMAP_SVMerge: Merging dual labelled smaps

In VilainLab/Nanotator: Next generation structural variant annotation and classification

Merging dual labelled smaps

Description

Merging dual labelled smaps

Usage

mergingSMAP_SVMerge(path, pattern, outMode = c("dataframe", "Text"), outpath)

Arguments

path	character. Path to the solo files directory.
pattern	character. Patternna for the solo files.
outMode	character. The ouput mode. Choices, dataframe or Text.
outpath	character. Path where the dual labelled merged samples are kept. Is mandatory if outMode is Text.

Value

Text files containg merged smaps from different samples

Examples

a <- mergingSMAP_SVMerge(
path = system.file("extdata", "SoloFile/", package="nanotatoR"),
pattern = "*.txt", outMode = "dataframe", 
outpath = system.file("extdata", "SoloFile/", package="nanotatoR"))

VilainLab/Nanotator documentation built on Aug. 2, 2024, 8:45 p.m.