alignCDSWithAlignedAASeq: Uses an amino acid multiple sequence alignment to guide the...
In asishallab/GeneFamilies: Analyses different properties of gene families
alignCDSWithAlignedAASeq R Documentation
Uses an amino acid multiple sequence alignment to guide the alignment of
codon sequence 'cds'.
Description
Uses an amino acid multiple sequence alignment to guide the alignment of
codon sequence 'cds'.
Usage
alignCDSWithAlignedAASeq(cds, aligned.aa.seq, aa.gap = "-",
codon.gap = "---")
Arguments
'cds'
a String representing the codon sequence to align.
'aligned.aa.seq'
a String representing the aligned amino acid
sequence.
'aa.gap'
the string used to represent a gap in the aligned AA sequence
'codon.gap'
the string used to represent a gap in the aligned codon
sequence
Value
A String representing the aligned codon sequence
asishallab/GeneFamilies documentation built on May 22, 2023, 11:30 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| alignCDSWithAlignedAASeq | R Documentation |
Uses an amino acid multiple sequence alignment to guide the alignment of codon sequence 'cds'.
Description
Uses an amino acid multiple sequence alignment to guide the alignment of codon sequence 'cds'.
Usage
alignCDSWithAlignedAASeq(cds, aligned.aa.seq, aa.gap = "-",
codon.gap = "---")
Arguments
'cds' |
a String representing the codon sequence to align. |
'aligned.aa.seq' |
a String representing the aligned amino acid sequence. |
'aa.gap' |
the string used to represent a gap in the aligned AA sequence |
'codon.gap' |
the string used to represent a gap in the aligned codon sequence |
Value
A String representing the aligned codon sequence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.