geneGroupSubfunctionalization: Invokes 'subfunctionalizationAnnotationBased' for all...
In asishallab/GeneFamilies: Analyses different properties of gene families
View source: R/annotationVectorSpace.R
geneGroupSubfunctionalization R Documentation
Invokes subfunctionalizationAnnotationBased for all gene.groups
(families) contained in argument gene.groups.lst, using argument
gene.classes to separate 'base genes' from 'evolved genes'.
Description
Invokes subfunctionalizationAnnotationBased for all gene.groups
(families) contained in argument gene.groups.lst, using argument
gene.classes to separate 'base genes' from 'evolved genes'.
Usage
geneGroupSubfunctionalization(gene.groups.lst, gene.classes)
Arguments
gene.groups.lst
A named list of character vectors holding gene IDs.
gene.classes
A named list of gene identifiers separated into a base
class and a class of evolved genes.
Value
NULL, if no subfunctionalization could be identified within any of
the gene families, or a data frame with the identified subfunctionalizations
(see subfunctionalizationAnnotationBased for details). An additional
column holds the name of the gene family.
asishallab/GeneFamilies documentation built on May 22, 2023, 11:30 a.m.
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View source: R/annotationVectorSpace.R
| geneGroupSubfunctionalization | R Documentation |
Invokes subfunctionalizationAnnotationBased for all gene.groups
(families) contained in argument gene.groups.lst, using argument
gene.classes to separate 'base genes' from 'evolved genes'.
Description
Invokes subfunctionalizationAnnotationBased for all gene.groups
(families) contained in argument gene.groups.lst, using argument
gene.classes to separate 'base genes' from 'evolved genes'.
Usage
geneGroupSubfunctionalization(gene.groups.lst, gene.classes)
Arguments
gene.groups.lst |
A named list of character vectors holding gene IDs. |
gene.classes |
A named list of gene identifiers separated into a base class and a class of evolved genes. |
Value
NULL, if no subfunctionalization could be identified within any of
the gene families, or a data frame with the identified subfunctionalizations
(see subfunctionalizationAnnotationBased for details). An additional
column holds the name of the gene family.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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