addGeneIdsCols2HomologsKaKsTable: Extracts the gene pairs' identifiers from the 'Sequence'...
In asishallab/GeneFamilies: Analyses different properties of gene families
View source: R/selection_funks.R
addGeneIdsCols2HomologsKaKsTable R Documentation
Extracts the gene pairs' identifiers from the 'Sequence' column of
'hom.kaks.tbl' and replaces this column with the parse result.
Description
Extracts the gene pairs' identifiers from the 'Sequence' column of
'hom.kaks.tbl' and replaces this column with the parse result.
Usage
addGeneIdsCols2HomologsKaKsTable(hom.kaks.tbl)
Arguments
hom.kaks.tbl
the result of calling 'readKaKsCalculatorOutput(...)' on
the result file of KaKs_Calculator used on homologs, that were NOT conserved
orthologs.
Value
A modified version of 'hom.kaks.tbl' in which the column 'Sequence'
is replaced with two columns 'gene.1' and 'gene.2'.
asishallab/GeneFamilies documentation built on May 22, 2023, 11:30 a.m.
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View source: R/selection_funks.R
| addGeneIdsCols2HomologsKaKsTable | R Documentation |
Extracts the gene pairs' identifiers from the 'Sequence' column of 'hom.kaks.tbl' and replaces this column with the parse result.
Description
Extracts the gene pairs' identifiers from the 'Sequence' column of 'hom.kaks.tbl' and replaces this column with the parse result.
Usage
addGeneIdsCols2HomologsKaKsTable(hom.kaks.tbl)
Arguments
hom.kaks.tbl |
the result of calling 'readKaKsCalculatorOutput(...)' on the result file of KaKs_Calculator used on homologs, that were NOT conserved orthologs. |
Value
A modified version of 'hom.kaks.tbl' in which the column 'Sequence' is replaced with two columns 'gene.1' and 'gene.2'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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