getFamilyDNAStringSet: Extracts the coding sequences of the gene members of the...
In asishallab/GeneFamilies: Analyses different properties of gene families
getFamilyDNAStringSet R Documentation
Extracts the coding sequences of the gene members of the argument family
from this package's database 'all.cds'. Warns, if not all members are found
in the database.
Description
Extracts the coding sequences of the gene members of the argument family
from this package's database 'all.cds'. Warns, if not all members are found
in the database.
Usage
getFamilyDNAStringSet(fam, cds = all.cds)
Arguments
fam
- The character vector of gene names member of the family.
cds
- The database of coding sequences as an instance of base::list
[seqinr]. Default is this packages database 'all.cds'.
Value
An instance of base::list as generated by
seqinr::read.fasta holding the coding sequences of the argument
family.
asishallab/GeneFamilies documentation built on July 28, 2024, 11:44 a.m.
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| getFamilyDNAStringSet | R Documentation |
Extracts the coding sequences of the gene members of the argument family from this package's database 'all.cds'. Warns, if not all members are found in the database.
Description
Extracts the coding sequences of the gene members of the argument family from this package's database 'all.cds'. Warns, if not all members are found in the database.
Usage
getFamilyDNAStringSet(fam, cds = all.cds)
Arguments
fam |
- The character vector of gene names member of the family. |
cds |
- The database of coding sequences as an instance of |
Value
An instance of base::list as generated by
seqinr::read.fasta holding the coding sequences of the argument
family.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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