AddNewMetaColumn: Add a new Seurat object metadata column based on current...

In bimberlabinternal/CellMembrane: A package with high-level wrappers and pipelines for single-cell RNA-seq tools

Add a new Seurat object metadata column based on current metadata

Description

This function creates a new Seurat object metadata column based on current formulas applied to current metadata columns

Usage

AddNewMetaColumn(
  seuratObj,
  varname,
  formulavector,
  defaultname,
  enforceFunctionalFormulae = TRUE
)

Arguments

seuratObj	The seurat object
varname	The name of the new metadata column
formulavector	vector of formulas, e.g.: c(Tcell_NaiveToEffector > 10 ~ "Effector", Tcell_NaiveToEffector < 5 ~ "Naive")
defaultname	The default value applied when none of the formulas in formulavec are TRUE
enforceFunctionalFormulae	Boolean determining whether or not to sanity check that all defined formulae in formulavector labeled at least one cell in the Seurat Object.

Value

Updated Seurat object

bimberlabinternal/CellMembrane documentation built on Oct. 16, 2024, 6:53 a.m.