CAGEr_Multicore: Multicore support in CAGEr

In charles-plessy/CAGEr: Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining

Multicore support in CAGEr

Description

CAGEr is in the transition towards using the BiocParallel for multicore parallelisation. On Windows platforms, the multicore support is disabled transparently, that is, attempts to use multiple cores are silently ignored.

Usage

CAGEr_Multicore(useMulticore = FALSE, nrCores = NULL)

Arguments

useMulticore	TRUE or FALSE
nrCores	number of cores to use (leave NULL to let BiocParallel choose).

Value

Returns either a MulticoreParam object or a SerialParam object.

Author(s)

Charles Plessy

Examples

CAGEr:::CAGEr_Multicore()
CAGEr:::CAGEr_Multicore(TRUE,)
CAGEr:::CAGEr_Multicore(TRUE, 3)
CAGEr:::CAGEr_Multicore(FALSE, 3)

charles-plessy/CAGEr documentation built on Nov. 4, 2023, 11:57 a.m.