consensusClustersTpm: Extracting consensus clusters tpm matrix from CAGEr object

consensusClustersTpmR Documentation

Extracting consensus clusters tpm matrix from CAGEr object

Description

Extracts a table with normalized CAGE tag values for consensus clusters across all samples from a CAGEr object.

Usage

consensusClustersTpm(object)

## S4 method for signature 'CAGEexp'
consensusClustersTpm(object)

Arguments

object

A CAGEr object.

Value

Returns the matrix of normalized expression values of CAGE clusters across all samples.

Author(s)

Vanja Haberle

See Also

consensusClustersSE

Other CAGEr clustering methods: distclu(), paraclu()

Examples

head(consensusClustersTpm(exampleCAGEexp))


charles-plessy/CAGEr documentation built on Aug. 2, 2024, 4:35 p.m.