celdaHeatmap: Render a stylable heatmap of count data based on celda...
In compbiomed/celda: CEllular Latent Dirichlet Allocation
Description
Usage
Arguments
Value
Examples
Description
Render a stylable heatmap of count data based on celda clustering results.
Usage
1
celdaHeatmap(counts, celda.mod, ...)
Arguments
counts
Integer matrix. Rows represent features and columns represent cells. This matrix should be the same as the one used to generate 'celda.mod'.
celda.mod
Celda object of class "celda_C", "celda_G", or "celda_CG".
...
Additional parameters.
Value
list A list containing dendrogram information and the heatmap grob
Examples
1
celdaHeatmap(celda.CG.sim$counts, celda.CG.mod)
compbiomed/celda documentation built on May 25, 2019, 3:58 a.m.
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Description Usage Arguments Value Examples
Description
Render a stylable heatmap of count data based on celda clustering results.
Usage
1 | celdaHeatmap(counts, celda.mod, ...)
|
Arguments
counts |
Integer matrix. Rows represent features and columns represent cells. This matrix should be the same as the one used to generate 'celda.mod'. |
celda.mod |
Celda object of class "celda_C", "celda_G", or "celda_CG". |
... |
Additional parameters. |
Value
list A list containing dendrogram information and the heatmap grob
Examples
1 | celdaHeatmap(celda.CG.sim$counts, celda.CG.mod)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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