featureModuleTable: Outputting a feature module table

In compbiomed/celda: CEllular Latent Dirichlet Allocation

Description

Creates a table that contains the list of features in each feature module

Usage

featureModuleTable(counts, celda.mod, output.file = NULL)

Arguments

counts	Integer matrix. Rows represent features and columns represent cells.
celda.mod	Celda object of class "celda_G" or "celda_CG".
output.file	File name for feature module table. If NULL, file will not be created. Default NULL.

Value

Matrix. Contains a list of features per each column (feature module)

Examples

featureModuleTable(celda.CG.sim$counts, celda.CG.mod, output.file = NULL) 


featureModuleTable(celda.CG.sim$counts, celda.CG.mod, output.file = "Celda_Output.txt") 

compbiomed/celda documentation built on May 25, 2019, 3:58 a.m.