Description Usage Arguments Value Author(s)
View source: R/dumped_functions.R
Import counts of directional Strand-seq reads aligned to PacBio reads and calculates binomial probabilites of PacBio reads being WW, CC or WC state.
1 | countProbOld(minusCounts, plusCounts, alpha = 0.1)
|
minusCounts |
Minus (Watson) read counts aligned to PacBio reads. |
plusCounts |
Plus (Crick) read counts aligned to PacBio reads. |
alpha |
Estimated level of background Strand-seq reads. |
A list
of binomial probabilities for a given counts of plus and minus reads
David Porubsky, Maryam Ghareghani
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