filterInput: Filter input data from the minimap
In daewoooo/SaaRclust: R Package to cluster long sequencing reads into chromosomes to facilitate de novo genome assembly.
Description
Usage
Arguments
Value
Author(s)
Description
This function filters loaded data from the minimap.
Usage
1
2
filterInput(inputData = NULL, quantileSSreads = c(0, 0.9),
minSSlibs = c(20, 25))
Arguments
inputData
A data.frame loaded by importTestData
quantileSSreads
A quantile range for number of SSreads mapped to PB read. (default: 0.4-0.9)
minSSlibs
A range for the minimal and maximal number of StrandS libs being represented per PB read.
Value
A filtered data.frame.
Author(s)
David Porubsky
daewoooo/SaaRclust documentation built on May 28, 2019, 7:50 p.m.
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Description Usage Arguments Value Author(s)
Description
This function filters loaded data from the minimap.
Usage
1 2 | filterInput(inputData = NULL, quantileSSreads = c(0, 0.9),
minSSlibs = c(20, 25))
|
Arguments
inputData |
A |
quantileSSreads |
A quantile range for number of SSreads mapped to PB read. (default: 0.4-0.9) |
minSSlibs |
A range for the minimal and maximal number of StrandS libs being represented per PB read. |
Value
A filtered data.frame.
Author(s)
David Porubsky
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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