hardClust: Hard clustering using k-means
In daewoooo/SaaRclust: R Package to cluster long sequencing reads into chromosomes to facilitate de novo genome assembly.
Description
Usage
Arguments
Value
Author(s)
Description
This function expects output from custom minimap test dataset that contains original locations of mapped reads in the genome.
Usage
1
2
Arguments
counts.l
A list of directional read counts per PB read per library.
num.clusters
Expected number of clusters. (for 22 autosomes == 44 clusters)
Value
A list of estimated theta values for every cluster and cell.
Author(s)
David Porubsky
daewoooo/SaaRclust documentation built on May 28, 2019, 7:50 p.m.
R Package Documentation
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Description Usage Arguments Value Author(s)
Description
This function expects output from custom minimap test dataset that contains original locations of mapped reads in the genome.
Usage
1 2 |
Arguments
counts.l |
A |
num.clusters |
Expected number of clusters. (for 22 autosomes == 44 clusters) |
Value
A list of estimated theta values for every cluster and cell.
Author(s)
David Porubsky
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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