mergeClusters: Hierarchical clustering for merging the kmeans clusters.
In daewoooo/SaaRclust: R Package to cluster long sequencing reads into chromosomes to facilitate de novo genome assembly.
Description
Usage
Arguments
Value
Author(s)
Description
This function takes as input the kmeans hard clustering output and the initialized thetas and merges the kmeans clusters based on thetas
Usage
1
mergeClusters(hard.clust, theta.l, k = 46)
Arguments
hard.clust
The kmeans hard clustering.
theta.l
A list of estimated theta values for each cluster and cell.
k
Desired number of clusters after merging.
Value
A new hard clustering with the correct number of clusters
Author(s)
Maryam Ghareghani
daewoooo/SaaRclust documentation built on May 28, 2019, 7:50 p.m.
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Description Usage Arguments Value Author(s)
Description
This function takes as input the kmeans hard clustering output and the initialized thetas and merges the kmeans clusters based on thetas
Usage
1 | mergeClusters(hard.clust, theta.l, k = 46)
|
Arguments
hard.clust |
The kmeans hard clustering. |
theta.l |
A |
k |
Desired number of clusters after merging. |
Value
A new hard clustering with the correct number of clusters
Author(s)
Maryam Ghareghani
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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