Description Usage Arguments Value Author(s)
Aggregate signal counts across a set of regions
1 2 3 4 5 6 7 8 9 10 11 | ## S4 method for signature 'DsATAC'
regionAggregation(
.object,
regGr,
type,
signal = NULL,
aggrFun = "median",
dropEmpty = TRUE,
bySample = TRUE,
chunkSize = 10000L
)
|
.object |
|
regGr |
|
type |
character string specifying a name for the region type |
signal |
character string specifying a name for the region type for the signal to be aggregated
If it is |
aggrFun |
aggregation function for signal counts. Will only be used if |
dropEmpty |
discard all regions with no observed signal counts |
bySample |
[only relevant if |
chunkSize |
[only relevant if |
a new DsATAC
object with aggregated signal counts per regions
Fabian Mueller
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.