cooler: Hi-C data in the cooler format
In dozmorovlab/HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
cooler R Documentation
Hi-C data in the cooler format
Description
Contains Hi-C data for the entire genome from the Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool file.
Usage
cooler
Format
A matrix with 4011620 rows and 7 columns in BEDPE format.
Value
A matrix.
Source
Data from the Index of Coolers. ftp://cooler.csail.mit.edu/coolers/hg19/Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool
dozmorovlab/HiCcompare documentation built on June 30, 2023, 3:09 a.m.
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| cooler | R Documentation |
Hi-C data in the cooler format
Description
Contains Hi-C data for the entire genome from the Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool file.
Usage
cooler
Format
A matrix with 4011620 rows and 7 columns in BEDPE format.
Value
A matrix.
Source
Data from the Index of Coolers. ftp://cooler.csail.mit.edu/coolers/hg19/Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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