split_centromere: Function to split hic.table into 2 subsets at the centromere

In dozmorovlab/HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets

Function to split hic.table into 2 subsets at the centromere

Description

Function to split hic.table into 2 subsets at the centromere

Usage

split_centromere(hic.table)

Arguments

hic.table

A hic.table or list of hic.table objects

Value

A list of hic.tables in which the matrices have been split at the centromere

Examples

data('HMEC.chr22')
data('NHEK.chr22')
hic.table <- create.hic.table(HMEC.chr22, NHEK.chr22, chr = 'chr22')
split <- split_centromere(hic.table)

dozmorovlab/HiCcompare documentation built on June 30, 2023, 3:09 a.m.